Final Multiqc Report
https://github.com/Daylily-Informatics/daylily (BRANCH:* sentb) (TAG:grape-ape.v1) (HASH:aa874bd2)
- Project/Budget
- da-us-west-2d-giab-sownsamp-test
- Budget @ Runtime
- $43.608 of $200.0 spent ( 21.804%)
- Spot Instances
- c6i.32xlarge c7i.48xlarge c7i.metal-48xl m7i.48xlarge m7i.metal-48xl r7i.48xlarge r7i.metal-48xl
- Spot Costs per hr
- median: $2.99 mean: $2.97 ( avg cost per vcpu,per min: $0.000258112 )
- FQ->BAM.sort avg Costs
- BAM mrkdup avg Cost
- 0 min, costing $0.00
- Results Dir (GB)
- 210G
Report
generated on 2025-05-13, 05:26 UTC
based on data in:
/fsx/analysis_results/ubuntu/ug_ds/daylily/results/day/hg38
Controls Concordance Report
Concordance Stats For The GIAB HC Regions For This Sample.
| mqc_id | SNPClass | Sample | TgtRegionSize | TN | FN | TP | FP | Fscore | Sensitivity-Recall | Specificity | FDR | PPV | Precision | AltId | CmpFootprint | AllVarMeanDP | CovBin | Aligner | SNVCaller |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Uds5x_HG006_408622-Z0116_0-ug-sentdug-All | All | Uds5x_HG006_408622-Z0116_0 | 377,862,616.0 | 377,419,684.0 | 116,539.0 | 326,393.0 | 52,181.0 | 0.8 | 0.7 | 1.0 | 0.1 | 0.9 | 0.9 | HG006 | clinvar_genes | -1.0 | -2.0 | ug | sentdug |
| Uds5x_HG006_408622-Z0116_0-ug-sentdug-DEL_50 | DEL_50 | Uds5x_HG006_408622-Z0116_0 | 377,862,616.0 | 377,836,691.0 | 12,587.0 | 13,338.0 | 7,020.0 | 0.6 | 0.5 | 1.0 | 0.3 | 0.7 | 0.7 | HG006 | clinvar_genes | -1.0 | -2.0 | ug | sentdug |
| Uds5x_HG006_408622-Z0116_0-ug-sentdug-DEL_gt50 | DEL_gt50 | Uds5x_HG006_408622-Z0116_0 | 377,862,616.0 | 377,862,610.0 | 6.0 | 0.0 | 104.0 | 0.0 | 1.0 | 1.0 | 0.0 | 0.0 | HG006 | clinvar_genes | -1.0 | -2.0 | ug | sentdug | |
| Uds5x_HG006_408622-Z0116_0-ug-sentdug-INS_50 | INS_50 | Uds5x_HG006_408622-Z0116_0 | 377,862,616.0 | 377,836,732.0 | 11,808.0 | 14,076.0 | 7,619.0 | 0.6 | 0.5 | 1.0 | 0.4 | 0.6 | 0.6 | HG006 | clinvar_genes | -1.0 | -2.0 | ug | sentdug |
| Uds5x_HG006_408622-Z0116_0-ug-sentdug-INS_gt50 | INS_gt50 | Uds5x_HG006_408622-Z0116_0 | 377,862,616.0 | 377,862,606.0 | 10.0 | 0.0 | 50.0 | 0.0 | 1.0 | 1.0 | 0.0 | 0.0 | HG006 | clinvar_genes | -1.0 | -2.0 | ug | sentdug | |
| Uds5x_HG006_408622-Z0116_0-ug-sentdug-Indel_50 | Indel_50 | Uds5x_HG006_408622-Z0116_0 | 377,862,616.0 | 377,860,872.0 | 1,167.0 | 577.0 | 379.0 | 0.4 | 0.3 | 1.0 | 0.4 | 0.6 | 0.6 | HG006 | clinvar_genes | -1.0 | -2.0 | ug | sentdug |
| Uds5x_HG006_408622-Z0116_0-ug-sentdug-Indel_gt50 | Indel_gt50 | Uds5x_HG006_408622-Z0116_0 | 377,862,616.0 | 377,862,540.0 | 49.0 | 27.0 | 28.0 | 0.4 | 0.4 | 1.0 | 0.5 | 0.5 | 0.5 | HG006 | clinvar_genes | -1.0 | -2.0 | ug | sentdug |
| Uds5x_HG006_408622-Z0116_0-ug-sentdug-SNPts | SNPts | Uds5x_HG006_408622-Z0116_0 | 377,862,616.0 | 377,594,769.0 | 61,042.0 | 206,805.0 | 23,090.0 | 0.8 | 0.8 | 1.0 | 0.1 | 0.9 | 0.9 | HG006 | clinvar_genes | -1.0 | -2.0 | ug | sentdug |
| Uds5x_HG006_408622-Z0116_0-ug-sentdug-SNPtv | SNPtv | Uds5x_HG006_408622-Z0116_0 | 377,862,616.0 | 377,741,176.0 | 29,870.0 | 91,570.0 | 13,891.0 | 0.8 | 0.8 | 1.0 | 0.1 | 0.9 | 0.9 | HG006 | clinvar_genes | -1.0 | -2.0 | ug | sentdug |
| Uds10x_HG006_408622-Z0116_0-ug-sentdug-All | All | Uds10x_HG006_408622-Z0116_0 | 2,518,942,743.0 | 2,515,246,280.0 | 309,743.0 | 3,386,720.0 | 38,506.0 | 1.0 | 0.9 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | giabHC | -1.0 | -2.0 | ug | sentdug |
| Uds10x_HG006_408622-Z0116_0-ug-sentdug-DEL_50 | DEL_50 | Uds10x_HG006_408622-Z0116_0 | 2,518,942,743.0 | 2,518,736,571.0 | 64,059.0 | 142,113.0 | 3,119.0 | 0.8 | 0.7 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | giabHC | -1.0 | -2.0 | ug | sentdug |
| Uds10x_HG006_408622-Z0116_0-ug-sentdug-DEL_gt50 | DEL_gt50 | Uds10x_HG006_408622-Z0116_0 | 2,518,942,743.0 | 2,518,942,742.0 | 0.0 | 1.0 | 10.0 | 0.2 | 1.0 | 1.0 | 0.9 | 0.1 | 0.1 | HG006 | giabHC | -1.0 | -2.0 | ug | sentdug |
| Uds10x_HG006_408622-Z0116_0-ug-sentdug-INS_50 | INS_50 | Uds10x_HG006_408622-Z0116_0 | 2,518,942,743.0 | 2,518,737,942.0 | 53,663.0 | 151,138.0 | 8,899.0 | 0.8 | 0.7 | 1.0 | 0.1 | 0.9 | 0.9 | HG006 | giabHC | -1.0 | -2.0 | ug | sentdug |
| Uds10x_HG006_408622-Z0116_0-ug-sentdug-INS_gt50 | INS_gt50 | Uds10x_HG006_408622-Z0116_0 | 2,518,942,743.0 | 2,518,942,733.0 | 6.0 | 4.0 | 4.0 | 0.4 | 0.4 | 1.0 | 0.5 | 0.5 | 0.5 | HG006 | giabHC | -1.0 | -2.0 | ug | sentdug |
| Uds10x_HG006_408622-Z0116_0-ug-sentdug-Indel_50 | Indel_50 | Uds10x_HG006_408622-Z0116_0 | 2,518,942,743.0 | 2,518,925,503.0 | 7,390.0 | 9,850.0 | 184.0 | 0.7 | 0.6 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | giabHC | -1.0 | -2.0 | ug | sentdug |
| Uds10x_HG006_408622-Z0116_0-ug-sentdug-Indel_gt50 | Indel_gt50 | Uds10x_HG006_408622-Z0116_0 | 2,518,942,743.0 | 2,518,942,455.0 | 43.0 | 245.0 | 0.0 | 0.9 | 0.9 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | giabHC | -1.0 | -2.0 | ug | sentdug |
| Uds10x_HG006_408622-Z0116_0-ug-sentdug-SNPts | SNPts | Uds10x_HG006_408622-Z0116_0 | 2,518,942,743.0 | 2,516,725,243.0 | 119,296.0 | 2,098,204.0 | 13,592.0 | 1.0 | 0.9 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | giabHC | -1.0 | -2.0 | ug | sentdug |
| Uds10x_HG006_408622-Z0116_0-ug-sentdug-SNPtv | SNPtv | Uds10x_HG006_408622-Z0116_0 | 2,518,942,743.0 | 2,517,892,292.0 | 65,286.0 | 985,165.0 | 12,698.0 | 1.0 | 0.9 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | giabHC | -1.0 | -2.0 | ug | sentdug |
| Uds15x_HG006_408622-Z0116_0-ug-sentdug-All | All | Uds15x_HG006_408622-Z0116_0 | 336,562,667.0 | 336,135,482.0 | 22,687.0 | 404,498.0 | 3,954.0 | 1.0 | 0.9 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | giabHC_x_clinvar_genes | -1.0 | -2.0 | ug | sentdug |
| Uds15x_HG006_408622-Z0116_0-ug-sentdug-DEL_50 | DEL_50 | Uds15x_HG006_408622-Z0116_0 | 336,562,667.0 | 336,538,861.0 | 5,932.0 | 17,874.0 | 299.0 | 0.9 | 0.8 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | giabHC_x_clinvar_genes | -1.0 | -2.0 | ug | sentdug |
| Uds15x_HG006_408622-Z0116_0-ug-sentdug-DEL_gt50 | DEL_gt50 | Uds15x_HG006_408622-Z0116_0 | 336,562,667.0 | 336,562,667.0 | 0.0 | 0.0 | 2.0 | 1.0 | 1.0 | 0.0 | 0.0 | HG006 | giabHC_x_clinvar_genes | -1.0 | -2.0 | ug | sentdug | ||
| Uds15x_HG006_408622-Z0116_0-ug-sentdug-INS_50 | INS_50 | Uds15x_HG006_408622-Z0116_0 | 336,562,667.0 | 336,539,197.0 | 4,940.0 | 18,530.0 | 931.0 | 0.9 | 0.8 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | giabHC_x_clinvar_genes | -1.0 | -2.0 | ug | sentdug |
| Uds15x_HG006_408622-Z0116_0-ug-sentdug-INS_gt50 | INS_gt50 | Uds15x_HG006_408622-Z0116_0 | 336,562,667.0 | 336,562,664.0 | 1.0 | 2.0 | 0.0 | 0.8 | 0.7 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | giabHC_x_clinvar_genes | -1.0 | -2.0 | ug | sentdug |
| Uds15x_HG006_408622-Z0116_0-ug-sentdug-Indel_50 | Indel_50 | Uds15x_HG006_408622-Z0116_0 | 336,562,667.0 | 336,560,816.0 | 633.0 | 1,218.0 | 32.0 | 0.8 | 0.7 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | giabHC_x_clinvar_genes | -1.0 | -2.0 | ug | sentdug |
| Uds15x_HG006_408622-Z0116_0-ug-sentdug-Indel_gt50 | Indel_gt50 | Uds15x_HG006_408622-Z0116_0 | 336,562,667.0 | 336,562,642.0 | 4.0 | 21.0 | 0.0 | 0.9 | 0.8 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | giabHC_x_clinvar_genes | -1.0 | -2.0 | ug | sentdug |
| Uds15x_HG006_408622-Z0116_0-ug-sentdug-SNPts | SNPts | Uds15x_HG006_408622-Z0116_0 | 336,562,667.0 | 336,302,327.0 | 7,018.0 | 253,322.0 | 1,536.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | giabHC_x_clinvar_genes | -1.0 | -2.0 | ug | sentdug |
| Uds15x_HG006_408622-Z0116_0-ug-sentdug-SNPtv | SNPtv | Uds15x_HG006_408622-Z0116_0 | 336,562,667.0 | 336,444,977.0 | 4,159.0 | 113,531.0 | 1,154.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | giabHC_x_clinvar_genes | -1.0 | -2.0 | ug | sentdug |
| Uds20x_HG006_408622-Z0116_0-ug-sentdug-All | All | Uds20x_HG006_408622-Z0116_0 | 2,799,325,643.0 | 2,795,731,889.0 | 44,741.0 | 3,549,013.0 | 329,789.0 | 0.9 | 1.0 | 1.0 | 0.1 | 0.9 | 0.9 | HG006 | ultima | -1.0 | -2.0 | ug | sentdug |
| Uds20x_HG006_408622-Z0116_0-ug-sentdug-DEL_50 | DEL_50 | Uds20x_HG006_408622-Z0116_0 | 2,799,325,643.0 | 2,799,163,659.0 | 11,604.0 | 150,380.0 | 43,931.0 | 0.8 | 0.9 | 1.0 | 0.2 | 0.8 | 0.8 | HG006 | ultima | -1.0 | -2.0 | ug | sentdug |
| Uds20x_HG006_408622-Z0116_0-ug-sentdug-DEL_gt50 | DEL_gt50 | Uds20x_HG006_408622-Z0116_0 | 2,799,325,643.0 | 2,799,325,618.0 | 24.0 | 1.0 | 493.0 | 0.0 | 0.0 | 1.0 | 1.0 | 0.0 | 0.0 | HG006 | ultima | -1.0 | -2.0 | ug | sentdug |
| Uds20x_HG006_408622-Z0116_0-ug-sentdug-INS_50 | INS_50 | Uds20x_HG006_408622-Z0116_0 | 2,799,325,643.0 | 2,799,170,379.0 | 6,804.0 | 148,460.0 | 35,619.0 | 0.9 | 1.0 | 1.0 | 0.2 | 0.8 | 0.8 | HG006 | ultima | -1.0 | -2.0 | ug | sentdug |
| Uds20x_HG006_408622-Z0116_0-ug-sentdug-INS_gt50 | INS_gt50 | Uds20x_HG006_408622-Z0116_0 | 2,799,325,643.0 | 2,799,325,623.0 | 11.0 | 9.0 | 284.0 | 0.1 | 0.5 | 1.0 | 1.0 | 0.0 | 0.0 | HG006 | ultima | -1.0 | -2.0 | ug | sentdug |
| Uds20x_HG006_408622-Z0116_0-ug-sentdug-Indel_50 | Indel_50 | Uds20x_HG006_408622-Z0116_0 | 2,799,325,643.0 | 2,799,311,513.0 | 388.0 | 13,742.0 | 4,304.0 | 0.9 | 1.0 | 1.0 | 0.2 | 0.8 | 0.8 | HG006 | ultima | -1.0 | -2.0 | ug | sentdug |
| Uds20x_HG006_408622-Z0116_0-ug-sentdug-Indel_gt50 | Indel_gt50 | Uds20x_HG006_408622-Z0116_0 | 2,799,325,643.0 | 2,799,324,965.0 | 24.0 | 654.0 | 445.0 | 0.7 | 1.0 | 1.0 | 0.4 | 0.6 | 0.6 | HG006 | ultima | -1.0 | -2.0 | ug | sentdug |
| Uds20x_HG006_408622-Z0116_0-ug-sentdug-SNPts | SNPts | Uds20x_HG006_408622-Z0116_0 | 2,799,325,643.0 | 2,797,105,273.0 | 16,208.0 | 2,204,162.0 | 155,319.0 | 1.0 | 1.0 | 1.0 | 0.1 | 0.9 | 0.9 | HG006 | ultima | -1.0 | -2.0 | ug | sentdug |
| Uds20x_HG006_408622-Z0116_0-ug-sentdug-SNPtv | SNPtv | Uds20x_HG006_408622-Z0116_0 | 2,799,325,643.0 | 2,798,284,360.0 | 9,678.0 | 1,031,605.0 | 89,394.0 | 1.0 | 1.0 | 1.0 | 0.1 | 0.9 | 0.9 | HG006 | ultima | -1.0 | -2.0 | ug | sentdug |
| Uds30x_HG006_408622-Z0116_0-ug-sentdug-All | All | Uds30x_HG006_408622-Z0116_0 | 336,562,667.0 | 336,135,491.0 | 17,271.0 | 409,905.0 | 3,362.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | giabHC_x_clinvar_genes | -1.0 | -2.0 | ug | sentdug |
| Uds30x_HG006_408622-Z0116_0-ug-sentdug-DEL_50 | DEL_50 | Uds30x_HG006_408622-Z0116_0 | 336,562,667.0 | 336,538,902.0 | 5,209.0 | 18,556.0 | 275.0 | 0.9 | 0.8 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | giabHC_x_clinvar_genes | -1.0 | -2.0 | ug | sentdug |
| Uds30x_HG006_408622-Z0116_0-ug-sentdug-DEL_gt50 | DEL_gt50 | Uds30x_HG006_408622-Z0116_0 | 336,562,667.0 | 336,562,667.0 | 0.0 | 0.0 | 2.0 | 1.0 | 1.0 | 0.0 | 0.0 | HG006 | giabHC_x_clinvar_genes | -1.0 | -2.0 | ug | sentdug | ||
| Uds30x_HG006_408622-Z0116_0-ug-sentdug-INS_50 | INS_50 | Uds30x_HG006_408622-Z0116_0 | 336,562,667.0 | 336,539,296.0 | 4,039.0 | 19,332.0 | 770.0 | 0.9 | 0.8 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | giabHC_x_clinvar_genes | -1.0 | -2.0 | ug | sentdug |
| Uds30x_HG006_408622-Z0116_0-ug-sentdug-INS_gt50 | INS_gt50 | Uds30x_HG006_408622-Z0116_0 | 336,562,667.0 | 336,562,664.0 | 1.0 | 2.0 | 0.0 | 0.8 | 0.7 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | giabHC_x_clinvar_genes | -1.0 | -2.0 | ug | sentdug |
| Uds30x_HG006_408622-Z0116_0-ug-sentdug-Indel_50 | Indel_50 | Uds30x_HG006_408622-Z0116_0 | 336,562,667.0 | 336,560,672.0 | 594.0 | 1,401.0 | 41.0 | 0.8 | 0.7 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | giabHC_x_clinvar_genes | -1.0 | -2.0 | ug | sentdug |
| Uds30x_HG006_408622-Z0116_0-ug-sentdug-Indel_gt50 | Indel_gt50 | Uds30x_HG006_408622-Z0116_0 | 336,562,667.0 | 336,562,637.0 | 3.0 | 27.0 | 0.0 | 0.9 | 0.9 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | giabHC_x_clinvar_genes | -1.0 | -2.0 | ug | sentdug |
| Uds30x_HG006_408622-Z0116_0-ug-sentdug-SNPts | SNPts | Uds30x_HG006_408622-Z0116_0 | 336,562,667.0 | 336,302,335.0 | 4,631.0 | 255,701.0 | 1,269.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | giabHC_x_clinvar_genes | -1.0 | -2.0 | ug | sentdug |
| Uds30x_HG006_408622-Z0116_0-ug-sentdug-SNPtv | SNPtv | Uds30x_HG006_408622-Z0116_0 | 336,562,667.0 | 336,444,987.0 | 2,794.0 | 114,886.0 | 1,005.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | giabHC_x_clinvar_genes | -1.0 | -2.0 | ug | sentdug |
| Uds40x_HG006_408622-Z0116_0-ug-sentdug-All | All | Uds40x_HG006_408622-Z0116_0 | 336,562,667.0 | 336,135,516.0 | 12,188.0 | 414,963.0 | 2,639.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | giabHC_x_clinvar_genes | -1.0 | -2.0 | ug | sentdug |
| Uds40x_HG006_408622-Z0116_0-ug-sentdug-DEL_50 | DEL_50 | Uds40x_HG006_408622-Z0116_0 | 336,562,667.0 | 336,538,950.0 | 4,083.0 | 19,634.0 | 289.0 | 0.9 | 0.8 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | giabHC_x_clinvar_genes | -1.0 | -2.0 | ug | sentdug |
| Uds40x_HG006_408622-Z0116_0-ug-sentdug-DEL_gt50 | DEL_gt50 | Uds40x_HG006_408622-Z0116_0 | 336,562,667.0 | 336,562,667.0 | 0.0 | 0.0 | 1.0 | 1.0 | 1.0 | 0.0 | 0.0 | HG006 | giabHC_x_clinvar_genes | -1.0 | -2.0 | ug | sentdug | ||
| Uds40x_HG006_408622-Z0116_0-ug-sentdug-INS_50 | INS_50 | Uds40x_HG006_408622-Z0116_0 | 336,562,667.0 | 336,539,486.0 | 2,761.0 | 20,420.0 | 745.0 | 0.9 | 0.9 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | giabHC_x_clinvar_genes | -1.0 | -2.0 | ug | sentdug |
| Uds40x_HG006_408622-Z0116_0-ug-sentdug-INS_gt50 | INS_gt50 | Uds40x_HG006_408622-Z0116_0 | 336,562,667.0 | 336,562,664.0 | 1.0 | 2.0 | 0.0 | 0.8 | 0.7 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | giabHC_x_clinvar_genes | -1.0 | -2.0 | ug | sentdug |
| Uds40x_HG006_408622-Z0116_0-ug-sentdug-Indel_50 | Indel_50 | Uds40x_HG006_408622-Z0116_0 | 336,562,667.0 | 336,560,414.0 | 509.0 | 1,744.0 | 54.0 | 0.9 | 0.8 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | giabHC_x_clinvar_genes | -1.0 | -2.0 | ug | sentdug |
| Uds40x_HG006_408622-Z0116_0-ug-sentdug-Indel_gt50 | Indel_gt50 | Uds40x_HG006_408622-Z0116_0 | 336,562,667.0 | 336,562,633.0 | 2.0 | 32.0 | 0.0 | 1.0 | 0.9 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | giabHC_x_clinvar_genes | -1.0 | -2.0 | ug | sentdug |
| Uds40x_HG006_408622-Z0116_0-ug-sentdug-SNPts | SNPts | Uds40x_HG006_408622-Z0116_0 | 336,562,667.0 | 336,302,355.0 | 3,108.0 | 257,204.0 | 847.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | giabHC_x_clinvar_genes | -1.0 | -2.0 | ug | sentdug |
| Uds40x_HG006_408622-Z0116_0-ug-sentdug-SNPtv | SNPtv | Uds40x_HG006_408622-Z0116_0 | 336,562,667.0 | 336,445,016.0 | 1,724.0 | 115,927.0 | 703.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | giabHC_x_clinvar_genes | -1.0 | -2.0 | ug | sentdug |
Rules Benchmark Data2
| combined_rule | sample | rule | s | h:m:s | max_rss | max_vms | max_uss | max_pss | io_in | io_out | mean_load | cpu_time | hostname | ip | nproc | cpu_efficiency | instance_type | region_az | spot_cost | snakemake_threads | task_cost | rule_prefix | rule_suffix |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| alignstats_smmary_compile-all. | all. | alignstats_smmary_compile | 42.9 | 0:00:42 | 8.1 | 26.3 | 1.4 | 1.8 | 2.4 | 0.0 | 0.0 | 0.0 | ip-10-0-0-216 | 52.11.194.193 | 8.0 | 0.0 | r7i.2xlarge | us-west-2d | 0.2 | 2.0 | 0.0 | alignstats_smmary_compile | NA |
| alignstats_summary-all. | all. | alignstats_summary | 0.7 | 0:00:00 | 15.4 | 38.6 | 6.3 | 6.9 | 0.0 | 0.0 | 0.0 | 0.0 | ip-10-0-0-216 | 52.11.194.193 | 8.0 | 0.0 | r7i.2xlarge | us-west-2d | 0.2 | 1.0 | 0.0 | alignstats_summary | NA |
| final_multiqc2-DAY_all. | DAY_all. | final_multiqc2 | 19.2 | 0:00:19 | 134.1 | 2,769.1 | 128.7 | 130.6 | 2,787.9 | 0.0 | 43.6 | 8.6 | ip-10-0-0-216 | 52.11.194.193 | 8.0 | 0.4 | r7i.2xlarge | us-west-2d | 0.2 | 4.0 | 0.0 | final_multiqc2 | NA |
| ug.alignstats-Uds5x_HG006_408622-Z0116_0. | Uds5x_HG006_408622-Z0116_0. | ug.alignstats | 144.4 | 0:02:24 | 2,057.3 | 4,139.5 | 2,068.5 | 2,069.3 | 270.4 | 0.0 | 276.9 | 400.3 | i192-dy-all-3 | 10.0.1.102 | 192.0 | 2.8 | c7i.48xlarge | us-west-2d | 3.0 | 32.0 | 0.0 | ug | alignstats |
| ug.alignstats-Uds10x_HG006_408622-Z0116_0. | Uds10x_HG006_408622-Z0116_0. | ug.alignstats | 287.3 | 0:04:47 | 2,019.4 | 4,165.5 | 2,031.8 | 2,032.2 | 541.5 | 0.0 | 294.2 | 845.5 | i192-dy-all-2 | 10.0.1.32 | 192.0 | 2.9 | c7i.metal-48xl | us-west-2d | 2.6 | 32.0 | 0.0 | ug | alignstats |
| ug.alignstats-Uds15x_HG006_408622-Z0116_0. | Uds15x_HG006_408622-Z0116_0. | ug.alignstats | 395.7 | 0:06:35 | 2,056.5 | 4,156.2 | 2,069.1 | 2,069.7 | 353.1 | 0.0 | 291.3 | 1,152.9 | i192-dy-all-3 | 10.0.1.102 | 192.0 | 2.9 | c7i.48xlarge | us-west-2d | 3.0 | 32.0 | 0.1 | ug | alignstats |
| ug.alignstats-Uds20x_HG006_408622-Z0116_0. | Uds20x_HG006_408622-Z0116_0. | ug.alignstats | 507.1 | 0:08:27 | 2,017.3 | 4,161.9 | 2,033.7 | 2,034.1 | 606.0 | 0.1 | 305.7 | 1,551.1 | i192-dy-all-3 | 10.0.1.102 | 192.0 | 3.1 | c7i.48xlarge | us-west-2d | 3.0 | 32.0 | 0.1 | ug | alignstats |
| ug.alignstats-Uds30x_HG006_408622-Z0116_0. | Uds30x_HG006_408622-Z0116_0. | ug.alignstats | 489.4 | 0:08:09 | 2,120.9 | 4,225.3 | 2,138.5 | 2,138.9 | 255.5 | 0.1 | 301.6 | 1,476.7 | i192-dy-all-2 | 10.0.1.98 | 192.0 | 3.0 | m7i.metal-48xl | us-west-2d | 3.0 | 32.0 | 0.1 | ug | alignstats |
| ug.alignstats-Uds40x_HG006_408622-Z0116_0. | Uds40x_HG006_408622-Z0116_0. | ug.alignstats | 1,329.6 | 0:22:09 | 2,065.0 | 4,174.1 | 2,081.2 | 2,081.5 | 560.8 | 0.2 | 235.0 | 3,125.0 | i192-dy-all-13 | 10.0.1.234 | 192.0 | 2.4 | m7i.metal-48xl | us-west-2d | 3.0 | 32.0 | 0.2 | ug | alignstats |
| ug.sentdug.1-24-Uds5x_HG006_408622-Z0116_0. | Uds5x_HG006_408622-Z0116_0. | ug.sentdug.1-24 | 416.1 | 0:06:56 | 10,775.7 | 26,124.6 | 10,330.1 | 10,335.4 | 11,916.0 | 2,784.4 | 15,481.1 | 33,851.2 | i192-dy-all-5 | 10.0.1.93 | 192.0 | 81.3 | c7i.metal-48xl | us-west-2d | 2.6 | 192.0 | 0.3 | ug | sentdug.1-24 |
| ug.sentdug.1-24-Uds10x_HG006_408622-Z0116_0. | Uds10x_HG006_408622-Z0116_0. | ug.sentdug.1-24 | 746.0 | 0:12:25 | 12,294.2 | 32,972.1 | 11,678.6 | 11,684.0 | 21,030.0 | 3,671.3 | 14,927.0 | 42,863.2 | i192-dy-all-6 | 10.0.1.190 | 192.0 | 57.5 | c7i.metal-48xl | us-west-2d | 2.6 | 192.0 | 0.5 | ug | sentdug.1-24 |
| ug.sentdug.1-24-Uds15x_HG006_408622-Z0116_0. | Uds15x_HG006_408622-Z0116_0. | ug.sentdug.1-24 | 1,018.9 | 0:16:58 | 13,230.8 | 40,067.1 | 13,192.4 | 13,197.8 | 715.8 | 3,683.2 | 15,284.7 | 49,028.2 | i192-dy-all-2 | 10.0.1.32 | 192.0 | 48.1 | c7i.metal-48xl | us-west-2d | 2.6 | 192.0 | 0.7 | ug | sentdug.1-24 |
| ug.sentdug.1-24-Uds20x_HG006_408622-Z0116_0. | Uds20x_HG006_408622-Z0116_0. | ug.sentdug.1-24 | 1,375.5 | 0:22:55 | 14,233.9 | 44,677.1 | 14,222.9 | 14,226.8 | 42,171.5 | 4,122.3 | 15,932.8 | 54,297.3 | i192-dy-all-5 | 10.0.1.159 | 192.0 | 39.5 | c7i.metal-48xl | us-west-2d | 2.6 | 192.0 | 1.0 | ug | sentdug.1-24 |
| ug.sentdug.1-24-Uds30x_HG006_408622-Z0116_0. | Uds30x_HG006_408622-Z0116_0. | ug.sentdug.1-24 | 1,324.1 | 0:22:04 | 14,311.0 | 43,791.1 | 14,318.8 | 14,322.8 | 42,094.3 | 4,122.3 | 15,832.8 | 52,386.0 | i192-dy-all-3 | 10.0.1.246 | 192.0 | 39.6 | c7i.48xlarge | us-west-2d | 3.0 | 192.0 | 1.1 | ug | sentdug.1-24 |
| ug.sentdug.1-24-Uds40x_HG006_408622-Z0116_0. | Uds40x_HG006_408622-Z0116_0. | ug.sentdug.1-24 | 2,601.0 | 0:43:20 | 14,927.5 | 54,323.1 | 14,957.9 | 14,963.2 | 91,979.1 | 4,002.4 | 15,537.2 | 56,374.1 | i192-dy-all-12 | 10.0.1.29 | 192.0 | 21.7 | m7i.metal-48xl | us-west-2d | 3.0 | 192.0 | 2.2 | ug | sentdug.1-24 |
| ug.sentdug.concat.fofn-Uds5x_HG006_408622-Z0116_0. | Uds5x_HG006_408622-Z0116_0. | ug.sentdug.concat.fofn | 0.4 | 0:00:00 | 15.4 | 38.7 | 6.5 | 7.0 | 0.0 | 0.0 | 0.0 | 0.0 | ip-10-0-0-216 | 52.11.194.193 | 8.0 | 0.0 | r7i.2xlarge | us-west-2d | 0.2 | 1.0 | 0.0 | ug | sentdug.concat.fofn |
| ug.sentdug.concat.fofn-Uds10x_HG006_408622-Z0116_0. | Uds10x_HG006_408622-Z0116_0. | ug.sentdug.concat.fofn | 0.3 | 0:00:00 | 3.2 | 7.7 | 0.1 | 0.3 | 0.0 | 0.0 | 0.0 | 0.0 | ip-10-0-0-216 | 52.11.194.193 | 8.0 | 0.0 | r7i.2xlarge | us-west-2d | 0.2 | 1.0 | 0.0 | ug | sentdug.concat.fofn |
| ug.sentdug.concat.fofn-Uds15x_HG006_408622-Z0116_0. | Uds15x_HG006_408622-Z0116_0. | ug.sentdug.concat.fofn | 0.4 | 0:00:00 | 3.4 | 7.7 | 0.1 | 0.3 | 0.0 | 0.0 | 0.0 | 0.0 | ip-10-0-0-216 | 52.11.194.193 | 8.0 | 0.0 | r7i.2xlarge | us-west-2d | 0.2 | 1.0 | 0.0 | ug | sentdug.concat.fofn |
| ug.sentdug.concat.fofn-Uds20x_HG006_408622-Z0116_0. | Uds20x_HG006_408622-Z0116_0. | ug.sentdug.concat.fofn | 0.4 | 0:00:00 | 3.2 | 7.7 | 0.1 | 0.3 | 0.0 | 0.0 | 0.0 | 0.0 | ip-10-0-0-216 | 52.11.194.193 | 8.0 | 0.0 | r7i.2xlarge | us-west-2d | 0.2 | 1.0 | 0.0 | ug | sentdug.concat.fofn |
| ug.sentdug.concat.fofn-Uds30x_HG006_408622-Z0116_0. | Uds30x_HG006_408622-Z0116_0. | ug.sentdug.concat.fofn | 0.4 | 0:00:00 | 3.4 | 7.7 | 0.1 | 0.3 | 0.0 | 0.0 | 0.0 | 0.0 | ip-10-0-0-216 | 52.11.194.193 | 8.0 | 0.0 | r7i.2xlarge | us-west-2d | 0.2 | 1.0 | 0.0 | ug | sentdug.concat.fofn |
| ug.sentdug.concat.fofn-Uds40x_HG006_408622-Z0116_0. | Uds40x_HG006_408622-Z0116_0. | ug.sentdug.concat.fofn | 0.4 | 0:00:00 | 3.2 | 7.7 | 0.1 | 0.3 | 0.0 | 0.0 | 0.0 | 0.0 | ip-10-0-0-216 | 52.11.194.193 | 8.0 | 0.0 | r7i.2xlarge | us-west-2d | 0.2 | 1.0 | 0.0 | ug | sentdug.concat.fofn |
| ug.sentdug.concordance-Uds5x_HG006_408622-Z0116_0. | Uds5x_HG006_408622-Z0116_0. | ug.sentdug.concordance | 2,023.7 | 0:33:43 | 77,339.2 | 364,649.9 | 77,391.8 | 77,392.8 | 3,638.0 | 8,138.3 | 111.3 | 377.1 | i192-dy-all-9 | 10.0.1.108 | 192.0 | 0.2 | c7i.metal-48xl | us-west-2d | 2.6 | 96.0 | 0.7 | ug | sentdug.concordance |
| ug.sentdug.concordance-Uds10x_HG006_408622-Z0116_0. | Uds10x_HG006_408622-Z0116_0. | ug.sentdug.concordance | 2,174.5 | 0:36:14 | 70,503.9 | 364,651.7 | 70,553.0 | 70,554.3 | 1,807.8 | 10,286.8 | 63.3 | 331.9 | i192-dy-all-2 | 10.0.1.32 | 192.0 | 0.2 | c7i.metal-48xl | us-west-2d | 2.6 | 96.0 | 0.8 | ug | sentdug.concordance |
| ug.sentdug.concordance-Uds15x_HG006_408622-Z0116_0. | Uds15x_HG006_408622-Z0116_0. | ug.sentdug.concordance | 2,262.6 | 0:37:42 | 74,148.7 | 364,649.9 | 74,165.4 | 74,166.5 | 3,336.1 | 11,214.3 | 80.1 | 401.8 | i192-dy-all-2 | 10.0.1.32 | 192.0 | 0.2 | c7i.metal-48xl | us-west-2d | 2.6 | 96.0 | 0.8 | ug | sentdug.concordance |
| ug.sentdug.concordance-Uds20x_HG006_408622-Z0116_0. | Uds20x_HG006_408622-Z0116_0. | ug.sentdug.concordance | 2,279.9 | 0:37:59 | 82,337.1 | 364,649.9 | 82,396.2 | 82,397.3 | 2,734.2 | 11,228.0 | 74.4 | 316.6 | i192-dy-all-1 | 10.0.1.73 | 192.0 | 0.1 | c7i.metal-48xl | us-west-2d | 2.6 | 96.0 | 0.8 | ug | sentdug.concordance |
| ug.sentdug.concordance-Uds30x_HG006_408622-Z0116_0. | Uds30x_HG006_408622-Z0116_0. | ug.sentdug.concordance | 2,281.5 | 0:38:01 | 95,742.5 | 719,838.3 | 95,747.7 | 95,748.8 | 2,403.1 | 11,235.1 | 63.3 | 322.5 | i192-dy-all-1 | 10.0.1.52 | 192.0 | 0.1 | m7i.metal-48xl | us-west-2d | 3.0 | 96.0 | 0.9 | ug | sentdug.concordance |
| ug.sentdug.concordance-Uds40x_HG006_408622-Z0116_0. | Uds40x_HG006_408622-Z0116_0. | ug.sentdug.concordance | 2,568.7 | 0:42:48 | 66,979.2 | 364,649.9 | 67,034.8 | 67,036.1 | 2,747.5 | 12,019.0 | 52.3 | 411.4 | i192-dy-all-4 | 10.0.1.66 | 192.0 | 0.2 | c7i.metal-48xl | us-west-2d | 2.6 | 96.0 | 0.9 | ug | sentdug.concordance |
| ug.sentdug.merge-Uds5x_HG006_408622-Z0116_0. | Uds5x_HG006_408622-Z0116_0. | ug.sentdug.merge | 15.7 | 0:00:15 | 82.1 | 13,291.1 | 84.1 | 84.5 | 196.8 | 452.0 | 222.1 | 9.6 | i192-dy-all-9 | 10.0.1.108 | 192.0 | 0.6 | c7i.metal-48xl | us-west-2d | 2.6 | 64.0 | 0.0 | ug | sentdug.merge |
| ug.sentdug.merge-Uds10x_HG006_408622-Z0116_0. | Uds10x_HG006_408622-Z0116_0. | ug.sentdug.merge | 21.0 | 0:00:20 | 79.1 | 12,523.1 | 85.5 | 85.8 | 0.0 | 297.6 | 202.3 | 49.6 | i192-dy-all-2 | 10.0.1.32 | 192.0 | 2.4 | c7i.metal-48xl | us-west-2d | 2.6 | 64.0 | 0.0 | ug | sentdug.merge |
| ug.sentdug.merge-Uds15x_HG006_408622-Z0116_0. | Uds15x_HG006_408622-Z0116_0. | ug.sentdug.merge | 23.3 | 0:00:23 | 76.1 | 12,971.1 | 84.1 | 84.8 | 7.7 | 304.0 | 189.6 | 50.0 | i192-dy-all-2 | 10.0.1.32 | 192.0 | 2.1 | c7i.metal-48xl | us-west-2d | 2.6 | 64.0 | 0.0 | ug | sentdug.merge |
| ug.sentdug.merge-Uds20x_HG006_408622-Z0116_0. | Uds20x_HG006_408622-Z0116_0. | ug.sentdug.merge | 23.4 | 0:00:23 | 82.1 | 13,483.1 | 84.1 | 84.5 | 6.0 | 316.5 | 188.2 | 51.1 | i192-dy-all-1 | 10.0.1.73 | 192.0 | 2.2 | c7i.metal-48xl | us-west-2d | 2.6 | 64.0 | 0.0 | ug | sentdug.merge |
| ug.sentdug.merge-Uds30x_HG006_408622-Z0116_0. | Uds30x_HG006_408622-Z0116_0. | ug.sentdug.merge | 23.1 | 0:00:23 | 80.6 | 12,843.1 | 84.3 | 84.6 | 0.0 | 322.5 | 191.5 | 51.6 | i192-dy-all-1 | 10.0.1.52 | 192.0 | 2.2 | m7i.metal-48xl | us-west-2d | 3.0 | 64.0 | 0.0 | ug | sentdug.merge |
| ug.sentdug.merge-Uds40x_HG006_408622-Z0116_0. | Uds40x_HG006_408622-Z0116_0. | ug.sentdug.merge | 24.4 | 0:00:24 | 82.1 | 12,075.1 | 84.0 | 84.4 | 5.9 | 333.6 | 187.9 | 52.8 | i192-dy-all-4 | 10.0.1.66 | 192.0 | 2.2 | c7i.metal-48xl | us-west-2d | 2.6 | 64.0 | 0.0 | ug | sentdug.merge |
Alignstats Data
Alignstats Data.
| sample | aligner | AlignedBases | AlignedBasesPct | AlignedReadLengthMean | AlignedReadLengthMedian | AlignedReadLengthMode | AlignedReadLengthStandardDeviation | ChimericReadPairPct | DeletedBases | DeletedBasesPct | DuplicateBases | DuplicateBasesPct | DuplicateReads | DuplicateReadsPct | FilteredRecords | FilteredRecordsPct | InputFileName | InputFileSize | InsertSizeMean | InsertSizeMedian | InsertSizeMode | InsertSizeStandardDeviation | InsertedBases | InsertedBasesPct | MappedBases | MappedBasesPct | MappedReads | MappedReadsPct | MatchedBases | MatchedBasesPct | MismatchedBases | MismatchedBasesPct | PerfectBases | PerfectBasesPct | PerfectReads | PerfectReadsPct | Q20Bases | Q20BasesPct | R1AlignedBases | R1AlignedBasesPct | R1AlignedReadLengthMean | R1AlignedReadLengthMedian | R1AlignedReadLengthMode | R1AlignedReadLengthStandardDeviation | R1DeletedBases | R1DeletedBasesPct | R1InsertedBases | R1InsertedBasesPct | R1MappedBases | R1MappedBasesPct | R1MappedReads | R1MappedReadsPct | R1MatchedBases | R1MatchedBasesPct | R1MismatchedBases | R1MismatchedBasesPct | R1PerfectBases | R1PerfectBasesPct | R1PerfectReads | R1PerfectReadsPct | R1Q20Bases | R1Q20BasesPct | R1SoftClippedBases | R1SoftClippedBasesPct | R1SoftClippedReads | R1SoftClippedReadsPct | R1UnmappedBases | R1UnmappedBasesPct | R1UnmappedReads | R1UnmappedReadsPct | R1UnpairedReads | R1UnpairedReadsPct | R1YieldBases | R1YieldReads | R2AlignedBases | R2AlignedBasesPct | R2AlignedReadLengthMean | R2AlignedReadLengthMedian | R2AlignedReadLengthMode | R2AlignedReadLengthStandardDeviation | R2DeletedBases | R2DeletedBasesPct | R2InsertedBases | R2InsertedBasesPct | R2MappedBases | R2MappedBasesPct | R2MappedReads | R2MappedReadsPct | R2MatchedBases | R2MatchedBasesPct | R2MismatchedBases | R2MismatchedBasesPct | R2PerfectBases | R2PerfectBasesPct | R2PerfectReads | R2PerfectReadsPct | R2Q20Bases | R2Q20BasesPct | R2SoftClippedBases | R2SoftClippedBasesPct | R2SoftClippedReads | R2SoftClippedReadsPct | R2UnmappedBases | R2UnmappedBasesPct | R2UnmappedReads | R2UnmappedReadsPct | R2UnpairedReads | R2UnpairedReadsPct | R2YieldBases | R2YieldReads | SoftClippedBases | SoftClippedBasesPct | SoftClippedReads | SoftClippedReadsPct | TotalPairs | TotalRecords | TotalSameChrPairs | TotalSameChrPairsPct | UnfilteredRecords | UnfilteredRecordsPct | UnmappedBases | UnmappedBasesPct | UnmappedReads | UnmappedReadsPct | UnpairedReads | UnpairedReadsPct | WgsAlignedReads | WgsAlignedReadsPct | WgsCalculatedAlignedReads | WgsCovDuplicateReads | WgsCovDuplicateReadsPct | WgsCoverageBases1 | WgsCoverageBases10 | WgsCoverageBases100 | WgsCoverageBases1000 | WgsCoverageBases1000Pct | WgsCoverageBases100Pct | WgsCoverageBases10Pct | WgsCoverageBases15 | WgsCoverageBases15Pct | WgsCoverageBases1Pct | WgsCoverageBases20 | WgsCoverageBases20Pct | WgsCoverageBases30 | WgsCoverageBases30Pct | WgsCoverageBases40 | WgsCoverageBases40Pct | WgsCoverageBases50 | WgsCoverageBases500 | WgsCoverageBases500Pct | WgsCoverageBases50Pct | WgsCoverageBases60 | WgsCoverageBases60Pct | WgsCoverageBases70 | WgsCoverageBases70Pct | WgsCoverageMean | WgsCoverageMedian | WgsCoverageStandardDeviation | WgsExpectedAlignedReads | WgsFilteredLowBaseQualityBases | WgsFilteredOverlapBases | WgsReadsPaired | WgsReadsPairedWithMates | WgsTotalReads | YieldBases | YieldReads |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Uds5x_HG006_408622-Z0116_0.ug | ug | 17,570,560,240.0 | 96.8 | 284.3 | 302.0 | 319.0 | 59.5 | 100.0 | 97,108,169.0 | 0.6 | 1,592,271,466.0 | 8.8 | 5,701,784.0 | 9.2 | 0.0 | 0.0 | results/day/hg38/Uds5x_HG006_408622-Z0116_0/align/ug/Uds5x_HG006_408622-Z0116_0.ug.cram | 9,197,137,260.0 | 0.0 | 0.0 | 0.0 | 0.0 | 81,591,311.0 | 0.5 | 18,146,728,800.0 | 100.0 | 61,798,879.0 | 100.0 | 17,283,374,612.0 | 98.4 | 205,594,317.0 | 1.2 | 2,003,581,518.0 | 11.0 | 7,626,512.0 | 12.3 | 15,161,068,551.0 | 86.3 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 576,168,560.0 | 3.2 | 16,968,116.0 | 27.5 | 0.0 | 61,798,879.0 | 0.0 | 0.0 | 61,798,879.0 | 100.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 61,798,879.0 | 100.0 | 56,097,095.0 | 5,701,784.0 | 9.2 | 2,885,065,764.0 | 203,478,380.0 | 541,485.0 | 8,402.0 | 0.0 | 0.0 | 6.6 | 13,974,320.0 | 0.5 | 93.1 | 5,742,876.0 | 0.2 | 2,651,174.0 | 0.1 | 1,685,843.0 | 0.1 | 1,254,853.0 | 41,512.0 | 0.0 | 0.0 | 1,007,382.0 | 0.0 | 843,949.0 | 0.0 | 5.2 | 5.0 | 5.1 | 61,798,879.0 | 0.0 | 0.0 | 0.0 | 0.0 | 61,798,879.0 | 18,146,728,800.0 | 61,798,879.0 |
| Uds10x_HG006_408622-Z0116_0.ug | ug | 35,146,125,437.0 | 96.8 | 284.3 | 302.0 | 320.0 | 59.5 | 100.0 | 194,206,200.0 | 0.6 | 3,183,771,711.0 | 8.8 | 11,401,089.0 | 9.2 | 0.0 | 0.0 | results/day/hg38/Uds10x_HG006_408622-Z0116_0/align/ug/Uds10x_HG006_408622-Z0116_0.ug.cram | 18,364,050,974.0 | 0.0 | 0.0 | 0.0 | 0.0 | 163,184,614.0 | 0.5 | 36,298,760,616.0 | 100.0 | 123,616,546.0 | 100.0 | 34,571,739,368.0 | 98.4 | 411,201,455.0 | 1.2 | 4,008,106,077.0 | 11.0 | 15,256,863.0 | 12.3 | 30,326,685,036.0 | 86.3 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 1,152,635,179.0 | 3.2 | 33,933,973.0 | 27.5 | 0.0 | 123,616,546.0 | 0.0 | 0.0 | 123,616,546.0 | 100.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 123,616,546.0 | 100.0 | 112,215,457.0 | 11,401,089.0 | 9.2 | 2,917,785,302.0 | 1,811,687,414.0 | 1,239,198.0 | 41,197.0 | 0.0 | 0.0 | 58.4 | 513,403,219.0 | 16.6 | 94.1 | 70,132,238.0 | 2.3 | 9,595,055.0 | 0.3 | 5,282,072.0 | 0.2 | 3,488,805.0 | 146,259.0 | 0.0 | 0.1 | 2,543,206.0 | 0.1 | 1,996,155.0 | 0.1 | 10.4 | 10.0 | 9.7 | 123,616,546.0 | 0.0 | 0.0 | 0.0 | 0.0 | 123,616,546.0 | 36,298,760,616.0 | 123,616,546.0 |
| Uds15x_HG006_408622-Z0116_0.ug | ug | 52,716,941,304.0 | 96.8 | 284.3 | 302.0 | 320.0 | 59.5 | 100.0 | 291,253,124.0 | 0.6 | 4,775,722,124.0 | 8.8 | 17,101,790.0 | 9.2 | 0.0 | 0.0 | results/day/hg38/Uds15x_HG006_408622-Z0116_0/align/ug/Uds15x_HG006_408622-Z0116_0.ug.cram | 27,515,412,669.0 | 0.0 | 0.0 | 0.0 | 0.0 | 244,770,005.0 | 0.5 | 54,445,825,614.0 | 100.0 | 185,415,400.0 | 100.0 | 51,855,376,807.0 | 98.4 | 616,794,492.0 | 1.2 | 6,011,812,374.0 | 11.0 | 22,882,890.0 | 12.3 | 45,488,201,002.0 | 86.3 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 1,728,884,310.0 | 3.2 | 50,892,625.0 | 27.4 | 0.0 | 185,415,400.0 | 0.0 | 0.0 | 185,415,400.0 | 100.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 185,415,400.0 | 100.0 | 168,313,610.0 | 17,101,790.0 | 9.2 | 2,922,294,266.0 | 2,628,252,379.0 | 2,123,900.0 | 102,568.0 | 0.0 | 0.1 | 84.8 | 1,844,377,781.0 | 59.5 | 94.3 | 760,677,202.0 | 24.5 | 37,705,403.0 | 1.2 | 11,909,661.0 | 0.4 | 7,353,365.0 | 260,290.0 | 0.0 | 0.2 | 5,154,979.0 | 0.2 | 3,879,233.0 | 0.1 | 15.6 | 16.0 | 14.3 | 185,415,400.0 | 0.0 | 0.0 | 0.0 | 0.0 | 185,415,400.0 | 54,445,825,614.0 | 185,415,400.0 |
| Uds20x_HG006_408622-Z0116_0.ug | ug | 70,290,903,249.0 | 96.8 | 284.3 | 302.0 | 320.0 | 59.5 | 100.0 | 388,386,739.0 | 0.6 | 6,366,370,453.0 | 8.8 | 22,798,119.0 | 9.2 | 0.0 | 0.0 | results/day/hg38/Uds20x_HG006_408622-Z0116_0/align/ug/Uds20x_HG006_408622-Z0116_0.ug.cram | 36,662,560,821.0 | 0.0 | 0.0 | 0.0 | 0.0 | 326,387,666.0 | 0.5 | 72,596,307,522.0 | 100.0 | 247,227,869.0 | 100.0 | 69,142,075,395.0 | 98.4 | 822,440,188.0 | 1.2 | 8,016,671,210.0 | 11.0 | 30,514,041.0 | 12.3 | 60,652,180,785.0 | 86.3 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 2,305,404,273.0 | 3.2 | 67,855,236.0 | 27.4 | 0.0 | 247,227,869.0 | 0.0 | 0.0 | 247,227,869.0 | 100.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 247,227,869.0 | 100.0 | 224,429,750.0 | 22,798,119.0 | 9.2 | 2,924,309,145.0 | 2,808,916,841.0 | 3,400,732.0 | 145,765.0 | 0.0 | 0.1 | 90.6 | 2,535,914,518.0 | 81.8 | 94.3 | 1,874,459,989.0 | 60.5 | 311,745,526.0 | 10.1 | 27,718,220.0 | 0.9 | 13,421,486.0 | 402,671.0 | 0.0 | 0.4 | 8,972,705.0 | 0.3 | 6,574,855.0 | 0.2 | 20.8 | 21.0 | 18.9 | 247,227,869.0 | 0.0 | 0.0 | 0.0 | 0.0 | 247,227,869.0 | 72,596,307,522.0 | 247,227,869.0 |
| Uds30x_HG006_408622-Z0116_0.ug | ug | 70,290,903,249.0 | 96.8 | 284.3 | 302.0 | 320.0 | 59.5 | 100.0 | 388,386,739.0 | 0.6 | 6,366,370,453.0 | 8.8 | 22,798,119.0 | 9.2 | 0.0 | 0.0 | results/day/hg38/Uds30x_HG006_408622-Z0116_0/align/ug/Uds30x_HG006_408622-Z0116_0.ug.cram | 36,661,271,705.0 | 0.0 | 0.0 | 0.0 | 0.0 | 326,387,666.0 | 0.5 | 72,596,307,522.0 | 100.0 | 247,227,869.0 | 100.0 | 69,142,075,395.0 | 98.4 | 822,440,188.0 | 1.2 | 8,016,671,210.0 | 11.0 | 30,514,041.0 | 12.3 | 60,652,180,785.0 | 86.3 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 2,305,404,273.0 | 3.2 | 67,855,236.0 | 27.4 | 0.0 | 247,227,869.0 | 0.0 | 0.0 | 247,227,869.0 | 100.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 247,227,869.0 | 100.0 | 224,429,750.0 | 22,798,119.0 | 9.2 | 2,924,309,145.0 | 2,808,916,841.0 | 3,400,732.0 | 145,765.0 | 0.0 | 0.1 | 90.6 | 2,535,914,518.0 | 81.8 | 94.3 | 1,874,459,989.0 | 60.5 | 311,745,526.0 | 10.1 | 27,718,220.0 | 0.9 | 13,421,486.0 | 402,671.0 | 0.0 | 0.4 | 8,972,705.0 | 0.3 | 6,574,855.0 | 0.2 | 20.8 | 21.0 | 18.9 | 247,227,869.0 | 0.0 | 0.0 | 0.0 | 0.0 | 247,227,869.0 | 72,596,307,522.0 | 247,227,869.0 |
| Uds40x_HG006_408622-Z0116_0.ug | ug | 140,584,330,954.0 | 96.8 | 284.3 | 302.0 | 320.0 | 59.5 | 100.0 | 776,757,548.0 | 0.6 | 12,730,946,239.0 | 8.8 | 45,589,632.0 | 9.2 | 0.0 | 0.0 | results/day/hg38/Uds40x_HG006_408622-Z0116_0/align/ug/Uds40x_HG006_408622-Z0116_0.ug.cram | 73,160,240,878.0 | 0.0 | 0.0 | 0.0 | 0.0 | 652,858,907.0 | 0.5 | 145,195,727,627.0 | 100.0 | 494,458,760.0 | 100.0 | 138,286,419,881.0 | 98.4 | 1,645,052,166.0 | 1.2 | 16,032,561,392.0 | 11.0 | 61,022,085.0 | 12.3 | 121,306,263,326.0 | 86.3 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 4,611,396,673.0 | 3.2 | 135,718,555.0 | 27.4 | 0.0 | 494,458,760.0 | 0.0 | 0.0 | 494,458,760.0 | 100.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 494,458,760.0 | 100.0 | 448,869,128.0 | 45,589,632.0 | 9.2 | 2,927,684,424.0 | 2,902,413,077.0 | 12,875,186.0 | 403,257.0 | 0.0 | 0.4 | 93.6 | 2,878,578,197.0 | 92.9 | 94.4 | 2,823,963,330.0 | 91.1 | 2,603,567,120.0 | 84.0 | 1,958,215,526.0 | 63.2 | 831,755,016.0 | 943,126.0 | 0.0 | 26.8 | 168,239,617.0 | 5.4 | 36,760,874.0 | 1.2 | 41.5 | 43.0 | 37.2 | 494,458,760.0 | 0.0 | 0.0 | 0.0 | 0.0 | 494,458,760.0 | 145,195,727,627.0 | 494,458,760.0 |